Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name odd
Flybase description The gene odd skipped is referred to in FlyBase by the symbol Dmel\odd (CG3851, FBgn0002985).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -35.7446 -1.429 1.477412 -18.2141 -31.179905 1.1561 -3.27234 -2.071171
    Affimetrix absolute value 3.269 7.115 9.052 4.445 3.995 8.765 6.955 7.359
    Affymetric present call in "x" number of chips 0 3 3 2 2 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: sequence-specific DNA binding transcription factor activity.
There is experimental evidence that it is involved in the biological process: negative regulation of transcription, DNA-dependent; imaginal disc-derived leg joint morphogenesis.
31 alleles are reported.
The phenotypes of these alleles are annotated with 15 unique terms, many of which group under: organ system; abdominal ventral denticle belt; cuticle; embryonic segment; embryonic head; cephalopharyngeal skeleton; thoracic segment; larval abdominal segment; abdominal 5 ventral denticle belt; abdominal segment 7; abdominal 3 ventral denticle belt; larval thorax.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Zinc finger, C2H2; Zinc finger, C2H2-like; Zinc finger, C2H2-type/integrase, DNA-binding.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression.
Peak expression observed within 00-06 hour embryonic stages.
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