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Gene name | okr | ||||||||||||||||||||||||||||||||||||
Flybase description | The gene okra is referred to in FlyBase by the symbol Dmel\okr (CG3736, FBgn0002989). | ||||||||||||||||||||||||||||||||||||
Expression data along the gut |
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Intestinal gene expression in different physiological conditions |
Ecc15: flies orally infected with Erwinia carotovora carotovora 15. Pe: flies orally infected with Pseudomonas entomophila. Pe gacA: flies orally infecte with Pseudomonas entomophila gacA. For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe. |
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Gene details (from Flybase) | It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: ATP-dependent DNA helicase activity. There is experimental evidence that it is involved in the biological process: double-strand break repair via synthesis-dependent strand annealing; double-strand break repair; oogenesis; response to ionizing radiation; dorsal appendage formation. 18 alleles are reported. The phenotypes of these alleles are annotated with: chorion; egg; oocyte; presumptive oocyte; follicle cell; karyosome; micropyle; dorsal appendage; nucleus. It has one annotated transcript and one annotated polypeptide. Protein features are: DEAD-like helicase; Helicase, C-terminal; Rad54, N-terminal; SNF2-related. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 00-06 hour embryonic stages. . |