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Gene name | peb | ||||||||||||||||||||||||||||||||||||
Flybase description | The gene pebbled is referred to in FlyBase by the symbol Dmel\peb (CG12212, FBgn0003053). | ||||||||||||||||||||||||||||||||||||
Expression data along the gut |
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Intestinal gene expression in different physiological conditions |
Ecc15: flies orally infected with Erwinia carotovora carotovora 15. Pe: flies orally infected with Pseudomonas entomophila. Pe gacA: flies orally infecte with Pseudomonas entomophila gacA. For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe. |
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Gene details (from Flybase) | It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: sequence-specific DNA binding transcription factor activity. There is experimental evidence for 13 unique biological process terms, many of which group under: anatomical structure development; biological regulation; multicellular organismal process; sensory organ development; embryonic development via the syncytial blastoderm; open tracheal system development; tissue homeostasis; cellular component organization or biogenesis; ommatidial rotation; anterior/posterior axis specification. 26 alleles are reported. The phenotypes of these alleles are annotated with 19 unique terms, many of which group under: organ system; cuticle; cephalopharyngeal skeleton; extended germ band embryo; organ system subdivision; taenidial fold; external compound sense organ; embryonic/larval tracheal system; pharyngeal sclerite; compound cell cluster organ; gland; rhabdomere; spiracle; late extended germ band embryo. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Zinc finger, C2H2; Zinc finger, C2H2-like; Zinc finger, C2H2-type/integrase, DNA-binding. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-18 hour embryonic stages. . |