Flygut: an atlas of the Drosophila adult midgut

 Mouche Logo lab lemaitre Bbcf logo
Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name put
Flybase description The gene punt is referred to in FlyBase by the symbol Dmel\put (CG7904, FBgn0003169).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.7372 -0.4715 -1.551015 -1.2998 -2.636239 -1.7603 -2.18657 -2.345953
    Affimetrix absolute value 7.634 7.444 7.558 8.022 7.372 7.748 7.442 7.125
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: activin receptor activity; activin binding; transforming growth factor beta receptor activity.
There is experimental evidence for 13 unique biological process terms, many of which group under: anatomical structure development; biological regulation; multicellular organismal process; regulation of biological process; embryonic development via the syncytial blastoderm; open tracheal system development; signaling; cellular component organization or biogenesis; cellular process involved in reproduction; embryonic hindgut morphogenesis; regulation of developmental process; regionalization.
44 alleles are reported.
The phenotypes of these alleles are annotated with 39 unique terms, many of which group under: organ system subdivision; adult segment; organ system; adult mesothoracic segment; external compound sense organ; embryonic/larval tracheal system; embryonic/larval hemocoel; presumptive embryonic/larval nervous system; hemocyte; primordium.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Activin type II receptor; Activin type II/Transforming growth factor-beta II receptor; Protein kinase, catalytic domain; Protein kinase-like domain; Serine/threonine-protein kinase, active site; Serine/threonine-protein kinase-like domain; TGF-beta receptor/activin receptor, type I/II.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed at stages throughout embryogenesis.
.