Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name rl
Flybase description The gene rolled is referred to in FlyBase by the symbol Dmel\rl (CG12559, FBgn0003256).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 1.2141 2.2202 1.925214 2.2305 0.469726 1.7783 0.59009 1.585017
    Affimetrix absolute value 8.678 8.758 9.121 9.536 8.937 9.385 8.852 8.878
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions There is not condition-dependent expression data available for this gene.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: transcription factor binding; JUN kinase activity; protein kinase binding.
There is experimental evidence for 14 unique biological process terms, many of which group under: biological regulation; response to chemical stimulus; anatomical structure development; cellular component organization or biogenesis; cellular response to inorganic substance; post-embryonic appendage morphogenesis; cellular response to stimulus; regulation of biological process; response to stress; post-embryonic organ morphogenesis.
101 alleles are reported.
The phenotypes of these alleles are annotated with 29 unique terms, many of which group under: organ system subdivision; external compound sense organ; adult segment; peripheral nervous system; nervous system; adult mesothoracic segment; eo support cell; rhabdomere; embryonic segment; primordium; imaginal precursor; adult cuticle.
It has 6 annotated transcripts and 6 annotated polypeptides.
Protein features are: ERK1/2 MAP kinase; MAP kinase, conserved site; Protein kinase, ATP binding site; Protein kinase, catalytic domain; Protein kinase-like domain; Serine/threonine-protein kinase domain; Serine/threonine-protein kinase, active site; Serine/threonine-protein kinase-like domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression.
Peak expression observed within 00-18 hour embryonic stages, during late larval stages, during early pupal stages, in adult female stages.
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