Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name rod
Flybase description The gene rough deal is referred to in FlyBase by the symbol Dmel\rod (CG1569, FBgn0003268).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -31.1561 -22.1794 -25.964609 -30.9455 -45.751331 -34.524 -41.18148 -27.936763
    Affimetrix absolute value 3.447 3.154 3.487 3.472 3.263 3.476 3.189 3.452
    Affymetric present call in "x" number of chips 2 0 2 3 2 2 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence that it is involved in the biological process: mitotic sister chromatid segregation.
19 alleles are reported.
The phenotypes of these alleles are annotated with: eye; trichogen cell; mitotic anaphase; intersegmental nerve; nuclear chromosome; spermatocyte; meiotic cell cycle.
It has one annotated transcript and one annotated polypeptide.
Protein features are: RZZ complex, subunit KNTC1/ROD, C-terminal.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression.
Peak expression observed within 00-12 hour embryonic stages.
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