Flygut: an atlas of the Drosophila adult midgut

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Gene name rt
Flybase description The gene rotated abdomen is referred to in FlyBase by the symbol Dmel\rt (CG6097, FBgn0003292).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -26.871 -13.6382 -20.188097 -22.9162 -33.325113 -26.1798 -25.28565 -21.425672
    Affimetrix absolute value 3.664 3.864 3.865 3.873 3.714 3.855 3.896 3.852
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: dolichyl-phosphate-mannose-protein mannosyltransferase activity.
There is experimental evidence that it is involved in the biological process: somatic muscle development; protein O-linked mannosylation; sarcomere organization; muscle attachment; regulation of synaptic activity.
28 alleles are reported.
The phenotypes of these alleles are annotated with: abdomen; adult cuticle; adult abdomen; embryonic/larval somatic muscle.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Glycosyl transferase, family 39; MIR; MIR motif.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression.
Peak expression observed within 12-18 embryonic stages.
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