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Gene name | so | ||||||||||||||||||||||||||||||||||||
Flybase description | The gene sine oculis is referred to in FlyBase by the symbol Dmel\so (CG11121, FBgn0003460). | ||||||||||||||||||||||||||||||||||||
Expression data along the gut |
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Intestinal gene expression in different physiological conditions |
Ecc15: flies orally infected with Erwinia carotovora carotovora 15. Pe: flies orally infected with Pseudomonas entomophila. Pe gacA: flies orally infecte with Pseudomonas entomophila gacA. For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe. |
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Gene details (from Flybase) | It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: protein binding; sequence-specific DNA binding. There is experimental evidence that it is involved in the biological process: entrainment of circadian clock; ring gland development; glial cell migration; circadian rhythm; optic lobe placode formation; compound eye morphogenesis; spermatogenesis; Bolwig's organ morphogenesis. 55 alleles are reported. The phenotypes of these alleles are annotated with 26 unique terms, many of which group under: organ system subdivision; nervous system; multi-cell-component structure; adult segment; external compound sense organ; peripheral nervous system; adult brain; presumptive embryonic/larval nervous system; primordium; larval head segment. It has one annotated transcript and one annotated polypeptide. Protein features are: Homeobox; Homeobox, conserved site; Homeodomain-like; Homeodomain-related. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed within 00-18 hour embryonic stages, at stages throughout the pupal period. . |