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Gene name | sqh | ||||||||||||||||||||||||||||||||||||
Flybase description | The gene spaghetti squash is referred to in FlyBase by the symbol Dmel\sqh (CG3595, FBgn0003514). | ||||||||||||||||||||||||||||||||||||
Expression data along the gut |
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Intestinal gene expression in different physiological conditions |
Ecc15: flies orally infected with Erwinia carotovora carotovora 15. Pe: flies orally infected with Pseudomonas entomophila. Pe gacA: flies orally infecte with Pseudomonas entomophila gacA. For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe. |
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Gene details (from Flybase) | It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: myosin heavy chain binding. There is experimental evidence that it is involved in the biological process: border follicle cell migration; nuclear axial expansion; wound healing; cytokinesis; formation of a compartment boundary; cell elongation involved in imaginal disc-derived wing morphogenesis; regulation of tube length, open tracheal system; imaginal disc-derived wing hair organization; regulation of actin cytoskeleton organization; neurogenesis. 31 alleles are reported. The phenotypes of these alleles are annotated with 19 unique terms, many of which group under: organ system; female germline cyst; portion of tissue; organ system subdivision; egg; adult segment; thoracic segment; imaginal precursor; hub cell; extended germ band embryo; cellular component organization or biogenesis; actomyosin contractile ring; external compound sense organ. It has one annotated transcript and one annotated polypeptide. Protein features are: Calcium-binding EF-hand; EF-HAND 2; EF-Hand 1, calcium-binding site; EF-hand; EF-hand-like domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of high expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, at stages throughout the pupal period. . |