Flygut: an atlas of the Drosophila adult midgut

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Gene name Su(var)205
Flybase description The gene Suppressor of variegation 205 is referred to in FlyBase by the symbol Dmel\Su(var)205 (CG8409, FBgn0003607).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 1.2174 1.8749 1.333467 1.6766 1.143336 1.4767 1.31619 1.3254
    Affimetrix absolute value 8.691 8.518 8.592 9.123 8.951 9.121 8.939 8.631
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: satellite DNA binding; rDNA binding; chromatin binding.
There is experimental evidence for 11 unique biological process terms, many of which group under: biological regulation; cellular component organization or biogenesis; regulation of cellular macromolecule biosynthetic process; regulation of metabolic process; negative regulation of gene expression, epigenetic; negative regulation of nitrogen compound metabolic process; chromatin organization; telomere maintenance; regulation of biological process; anatomical structure development.
82 alleles are reported.
The phenotypes of these alleles are annotated with: eye disc; eye; wing disc; chromosome, telomeric region; neuroblast; mitotic cell cycle; polytene chromosome; imaginal disc; embryonic/larval optic lobe; melanotic mass.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Chromo domain; Chromo domain subgroup; Chromo domain-like; Chromo domain/shadow; Chromo shadow; Chromo shadow, subgroup.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression.
Peak expression observed within 00-12 hour embryonic stages, during early pupal stages.
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