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Gene name | ttk | ||||||||||||||||||||||||||||||||||||
Flybase description | The gene tramtrack is referred to in FlyBase by the symbol Dmel\ttk (CG1856, FBgn0003870). | ||||||||||||||||||||||||||||||||||||
Expression data along the gut |
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Intestinal gene expression in different physiological conditions |
Ecc15: flies orally infected with Erwinia carotovora carotovora 15. Pe: flies orally infected with Pseudomonas entomophila. Pe gacA: flies orally infecte with Pseudomonas entomophila gacA. For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe. |
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Gene details (from Flybase) | It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: RNA polymerase II core promoter proximal region sequence-specific DNA binding; protein binding; chromatin binding; protein homodimerization activity. There is experimental evidence for 21 unique biological process terms, many of which group under: anatomical structure development; biological regulation; open tracheal system development; cellular component organization or biogenesis; sensory organ development; cellular process involved in reproduction; compound eye photoreceptor development; organ morphogenesis; regulation of developmental process; compound eye cone cell differentiation; neuromuscular process; behavioral interaction between organisms; locomotion; growth. 156 alleles are reported. The phenotypes of these alleles are annotated with 80 unique terms, many of which group under: organ system subdivision; external compound sense organ; nervous system; adult segment; peripheral nervous system; multi-cell-component structure; presumptive embryonic/larval nervous system; cuticle; imaginal precursor; eo support cell; taenidial fold; larval abdominal segment 5. It has 8 annotated transcripts and 8 annotated polypeptides. Protein features are: AT hook, DNA-binding motif; BTB/POZ; BTB/POZ fold; BTB/POZ-like; Zinc finger, C2H2; Zinc finger, C2H2-like; Zinc finger, C2H2-type/integrase, DNA-binding. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 06-18 hour embryonic stages. . |