Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name betaTub85D
Flybase description The gene β-Tubulin at 85D is referred to in FlyBase by the symbol Dmel\βTub85D (CG9359, FBgn0003889).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -64.9673 -34.5447 -46.696157 -57.8998 -77.988159 -69.7857 -73.39409 -53.242145
    Affimetrix absolute value 2.4 2.529 2.649 2.536 2.486 2.437 2.353 2.525
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: structural constituent of cytoskeleton.
There is experimental evidence that it is involved in the biological process: salivary gland morphogenesis.
20 alleles are reported.
The phenotypes of these alleles are annotated with 16 unique terms, many of which group under: organ system; multicellular structure; organelle; elongation stage spermatid; late extended germ band embryo; anatomical structure; cell cycle; non-connected developing system; M phase of meiotic cell cycle; primordium.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Beta tubulin; Beta tubulin, autoregulation binding site; Tubulin; Tubulin, C-terminal; Tubulin, conserved site; Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ, C-terminal; Tubulin/FtsZ, GTPase domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of extremely low expression.
Peak expression observed at stages throughout the pupal period, in adult male stages.
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