Flygut: an atlas of the Drosophila adult midgut

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Gene name RpL40
Flybase description The gene Ribosomal protein L40 is referred to in FlyBase by the symbol Dmel\RpL40 (CG2960, FBgn0003941).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 28.5888 39.5912 23.255184 24.1419 15.405106 23.9941 25.34549 21.923899
    Affimetrix absolute value 13.244 12.912 12.7 12.973 12.693 13.145 13.201 12.64
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: structural constituent of ribosome.
Based on sequence similarity, it is predicted to be involved in the biological process: ubiquitin-dependent protein catabolic process; translation; protein modification process.
3 alleles are reported.
The phenotype of these alleles is annotated with: mesothoracic tergum.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Ribosomal protein L40e; Ubiquitin; Ubiquitin conserved site; Ubiquitin subgroup; Ubiquitin supergroup.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression.
Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in adult female stages.
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