Flygut: an atlas of the Drosophila adult midgut

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Gene name Cyp1
Flybase description The gene Cyclophilin 1 is referred to in FlyBase by the symbol Dmel\Cyp1 (CG9916, FBgn0004432).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 25.1417 28.4096 20.930494 23.746 16.461134 23.3189 22.93332 21.961385
    Affimetrix absolute value 13.058 12.434 12.559 12.954 12.795 13.104 13.064 12.671
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: peptidyl-prolyl cis-trans isomerase activity.
There is experimental evidence that it is involved in the biological process: autophagic cell death; salivary gland cell autophagic cell death.
7 alleles are reported.
The phenotype of these alleles is annotated with: trichogen cell.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Cyclophilin-like; Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site.
Summary of modENCODE Temporal Expression Profile: Very high expression at all stages of development.
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