Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name mys
Flybase description The gene myospheroid is referred to in FlyBase by the symbol Dmel\mys (CG1560, FBgn0004657).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.366 1.3565 -1.098222 -0.3603 -1.796479 -0.2997 -2.13663 -0.627951
    Affimetrix absolute value 7.986 8.032 8.043 8.352 7.921 8.604 7.466 7.942
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
It is reported to have molecular function: cell adhesion molecule binding; receptor activity.
There is experimental evidence for 13 unique biological process terms, many of which group under: anatomical structure development; biological regulation; cellular component organization or biogenesis; locomotion; localization; regulation of developmental process; cell adhesion; sensory perception of smell; determination of adult lifespan; cell-substrate adhesion.
143 alleles are reported.
The phenotypes of these alleles are annotated with 56 unique terms, many of which group under: organ system; hypodermal muscle of larval abdomen; organ system subdivision; primordium; adult segment; nervous system; larval abdominal segment 5; late extended germ band embryo; larval abdominal segment; abdominal 7 longitudinal muscle; external compound sense organ.
It has one annotated transcript and one annotated polypeptide.
Protein features are: EGF, extracellular; Epidermal growth factor-like; Integrin beta subunit; Integrin beta subunit, N-terminal; Integrin beta subunit, cytoplasmic; Integrin beta subunit, tail; Plexin-like fold; Plexin/semaphorin/integrin; von Willebrand factor, type A.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression.
Peak expression observed at stages throughout embryogenesis, during late larval stages, at stages throughout the pupal period.
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