Flygut: an atlas of the Drosophila adult midgut

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Gene name sop
Flybase description The gene Ribosomal protein S2 is referred to in FlyBase by the symbol Dmel\RpS2 (CG5920, FBgn0004867).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 17.515 23.7064 17.961767 13.9171 11.35132 13.3192 12.98917 15.160962
    Affimetrix absolute value 12.535 12.176 12.339 12.178 12.26 12.288 12.239 12.133
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: structural constituent of ribosome.
Based on sequence similarity, it is predicted to be involved in the biological process: translation.
17 alleles are reported.
The phenotypes of these alleles are annotated with: ovary; macrochaeta; anterior crossvein; stage S5 oocyte; wing.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Double-stranded RNA-binding-like; Ribosomal protein S5; Ribosomal protein S5 domain 2-type fold; Ribosomal protein S5 domain 2-type fold, subgroup; Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal; Ribosomal protein S5, N-terminal, conserved site; Ribosomal protein S5, eukaryotic/archaeal.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression.
Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.
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