Flygut: an atlas of the Drosophila adult midgut

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Gene name Scsalpha
Flybase description The gene Succinyl coenzyme A synthetase α subunit is referred to in FlyBase by the symbol Dmel\Scsα (CG1065, FBgn0004888).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 7.2346 4.8822 4.721098 6.1668 2.809223 3.9778 10.9215 5.041321
    Affimetrix absolute value 11.261 9.892 10.4 11.008 10.247 10.551 11.996 10.551
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: succinate-CoA ligase (GDP-forming) activity.
There is experimental evidence that it is involved in the biological process: neurogenesis.
4 alleles are reported.
The phenotype of these alleles is annotated with: trichogen cell.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: ATP-citrate lyase/succinyl-CoA ligase; ATP-citrate lyase/succinyl-CoA ligase, active site; CoA-binding; NAD(P)-binding domain; Succinyl-CoA ligase, alpha subunit; Succinyl-CoA synthetase-like.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of high expression.
Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.
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