Flygut: an atlas of the Drosophila adult midgut

 Mouche Logo lab lemaitre Bbcf logo
Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name slbo
Flybase description The gene slow border cells is referred to in FlyBase by the symbol Dmel\slbo (CG4354, FBgn0005638).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -37.0966 -16.1769 -15.241948 -24.5832 -27.808982 -29.9191 -38.56258 -23.179595
    Affimetrix absolute value 3.211 3.622 4.311 3.771 3.968 3.701 3.282 3.73
    Affymetric present call in "x" number of chips 0 3 3 3 2 1 1 2
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: protein heterodimerization activity.
There is experimental evidence that it is involved in the biological process: border follicle cell migration.
65 alleles are reported.
The phenotypes of these alleles are annotated with: polar follicle cell; border follicle cell; wing.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Basic leucine zipper; Basic-leucine zipper (bZIP) transcription factor.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression.
Peak expression observed within 12-18 embryonic stages, during early pupal stages.
.