Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name Nmdar1
Flybase description The gene NMDA receptor 1 is referred to in FlyBase by the symbol Dmel\Nmdar1 (CG2902, FBgn0010399).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -70.6527 -40.264 -62.90487 -71.9042 -93.893382 -85.2587 -81.39183 -66.437012
    Affimetrix absolute value 2.281 2.294 2.208 2.226 2.224 2.149 2.208 2.218
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: ionotropic glutamate receptor activity.
There is experimental evidence that it is involved in the biological process: olfactory learning; phototaxis; associative learning; long-term memory.
17 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Calmodulin-binding domain C0, NMDA receptor, NR1 subunit; Extracellular ligand-binding receptor; Extracellular solute-binding protein, family 3; Glutamate receptor, L-glutamate/glycine-binding; Ionotropic glutamate receptor; NMDA receptor.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression.
Peak expression observed within 18-24 hour embryonic stages.
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