Flygut: an atlas of the Drosophila adult midgut

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Gene name Rya-r44F
Flybase description The gene Ryanodine receptor 44F is referred to in FlyBase by the symbol Dmel\Rya-r44F (CG10844, FBgn0011286).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -4.5061 -8.1416 -14.490545 -12.4234 -23.38707 -15.6644 -6.80411 -15.394719
    Affimetrix absolute value 6.317 4.626 4.338 4.766 4.221 4.592 5.832 4.384
    Affymetric present call in "x" number of chips 3 3 1 3 2 3 3 2
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: ryanodine-sensitive calcium-release channel activity.
There is experimental evidence that it is involved in the biological process: muscle contraction.
13 alleles are reported.
The phenotypes of these alleles are annotated with: larva; larval head; embryonic/larval dorsal vessel; presumptive embryonic/larval muscle system; embryonic/larval visceral muscle; embryonic/larval muscle system.
It has 10 annotated transcripts and 10 annotated polypeptides.
Protein features are: B30.
2/SPRY domain; Concanavalin A-like lectin/glucanase; EF-hand-like domain; Inositol 1,4,5-trisphosphate/ryanodine receptor; Intracellular calcium-release channel; Ion transport; MIR; MIR motif; RyR/IP3R Homology associated domain; Ryanodine Receptor TM 4-6; Ryanodine receptor; Ryanodine receptor Ryr; Ryanodine receptor-related; SPla/RYanodine receptor SPRY; SPla/RYanodine receptor subgroup.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression.
Peak expression observed during late pupal stages.
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