Flygut: an atlas of the Drosophila adult midgut

 Mouche Logo lab lemaitre Bbcf logo
Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name sced
Flybase description The gene scrambled is referred to in FlyBase by the symbol Dmel\sced (CG3273, FBgn0013732).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -16.898 -13.6172 -15.496688 -16.8708 -28.089719 -23.3287 -22.60437 -20.677421
    Affimetrix absolute value 4.34 3.863 4.258 4.315 3.978 4.028 4.064 3.894
    Affymetric present call in "x" number of chips 1 0 1 1 0 0 0 1
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence that it is involved in the biological process: pseudocleavage involved in syncytial blastoderm formation; actin filament reorganization involved in cell cycle.
11 alleles are reported.
The phenotypes of these alleles are annotated with: cycle 13 embryo; cycle 11 embryo; cycle 12 embryo.
It has one annotated transcript and one annotated polypeptide.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression.
Peak expression observed within 00-12 and 18-24 hour embryonic stages, in adult female stages.
.