Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name Rnp4F
Flybase description The gene RNA-binding protein 4F is referred to in FlyBase by the symbol Dmel\Rnp4F (CG3312, FBgn0014024).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -4.6463 -2.2298 -2.790272 -3.0952 -4.232223 -3.4899 -4.00249 -3.721349
    Affimetrix absolute value 6.195 6.475 6.712 6.761 6.687 6.763 6.571 6.371
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: mRNA binding.
There is experimental evidence that it is involved in the biological process: central nervous system development.
6 alleles are reported.
No phenotypic data is available.
It has 4 annotated transcripts and 4 annotated polypeptides.
Protein features are: Lsm interaction; Nucleotide-binding, alpha-beta plait; RNA recognition motif domain; RNA-processing protein, HAT helix.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression.
Peak expression observed within 00-06 hour embryonic stages, during early pupal stages, in adult female stages.
.