Flygut: an atlas of the Drosophila adult midgut

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Gene name Sr-CI
Flybase description The gene Scavenger receptor class C, type I is referred to in FlyBase by the symbol Dmel\Sr-CI (CG4099, FBgn0014033).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -28.7068 -18.8934 -26.075695 -26.225 -33.209471 -31.7884 -37.91182 -29.084343
    Affimetrix absolute value 3.568 3.409 3.484 3.681 3.758 3.592 3.319 3.435
    Affymetric present call in "x" number of chips 0 0 0 0 1 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
It is reported to have molecular function: scavenger receptor activity; polysaccharide binding.
It is reported to be involved in the biological process: defense response to Gram-negative bacterium; response to bacterium; defense response; immune response; phagocytosis.
4 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Complement control module; Concanavalin A-like lectin/glucanase; MAM domain; Somatomedin B domain; Sushi/SCR/CCP.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression.
Peak expression observed within 06-12 and 18-24 hour embryonic stages, during late larval stages, during early pupal stages.
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