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Gene name | cher | ||||||||||||||||||||||||||||||||||||
Flybase description | The gene cheerio is referred to in FlyBase by the symbol Dmel\cher (CG3937, FBgn0014141). | ||||||||||||||||||||||||||||||||||||
Expression data along the gut |
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Intestinal gene expression in different physiological conditions |
Ecc15: flies orally infected with Erwinia carotovora carotovora 15. Pe: flies orally infected with Pseudomonas entomophila. Pe gacA: flies orally infecte with Pseudomonas entomophila gacA. For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe. |
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Gene details (from Flybase) | It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: actin binding. There is experimental evidence that it is involved in the biological process: olfactory learning; protein localization; female germline ring canal formation, actin assembly; germarium-derived female germ-line cyst encapsulation; determination of adult lifespan; learning or memory; mitosis; female germline ring canal formation; germline ring canal formation; negative regulation of lamellocyte differentiation. 32 alleles are reported. The phenotypes of these alleles are annotated with 12 unique terms, many of which group under: organ system; multicellular structure; anatomical structure; portion of tissue; epithelial cell; ovariole; nurse cell ring canal; interfollicle cell; nurse cell; germarium. It has 6 annotated transcripts and 6 annotated polypeptides. Protein features are: Actinin-type, actin-binding, conserved site; Calponin homology domain; Filamin/ABP280 repeat; Filamin/ABP280 repeat-like; Immunoglobulin E-set; Immunoglobulin-like fold. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 12-18 embryonic stages, during late larval stages, during late pupal stages. . |