Flygut: an atlas of the Drosophila adult midgut

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Gene name cype
Flybase description The gene cyclope is referred to in FlyBase by the symbol Dmel\cype (CG14028, FBgn0015031).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 16.7079 19.072 16.219366 18.1151 10.036005 15.3786 19.91758 15.288126
    Affimetrix absolute value 12.45 11.836 12.145 12.563 12.057 12.495 12.865 12.105
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: cytochrome-c oxidase activity.
Based on sequence similarity, it is predicted to be involved in the biological process: mitochondrial electron transport, cytochrome c to oxygen.
19 alleles are reported.
The phenotypes of these alleles are annotated with 11 unique terms, many of which group under: organ system subdivision; organ system; adult segment; adult; multicellular structure; external compound sense organ; acellular anatomical structure; thoracic segment; region of integument; eo support cell; embryonic/larval integumentary system.
It has 3 annotated transcripts and 3 annotated polypeptides.
Protein features are: Cytochrome c oxidase subunit VIc.
Summary of modENCODE Temporal Expression Profile: Very high expression at all stages of development.
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