Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name rin
Flybase description The gene rasputin is referred to in FlyBase by the symbol Dmel\rin (CG9412, FBgn0015778).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -6.9962 -2.783 -3.748654 -3.3922 -5.788538 -4.595 -5.95928 -5.49166
    Affimetrix absolute value 5.612 6.148 6.277 6.634 6.268 6.368 6.013 5.824
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: mRNA binding; SH3 domain binding.
There is experimental evidence that it is involved in the biological process: Ras protein signal transduction; compound eye photoreceptor fate commitment; ommatidial rotation.
19 alleles are reported.
The phenotypes of these alleles are annotated with: eye disc; eye; eye photoreceptor cell; wing; ommatidial precursor cluster; ommatidium.
It has 5 annotated transcripts and 5 annotated polypeptides.
Protein features are: Nuclear transport factor 2; Nuclear transport factor 2, Eukaryote; Nucleotide-binding, alpha-beta plait; RNA recognition motif domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression.
Peak expression observed within 00-06 hour embryonic stages, in adult female stages.
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