Flygut: an atlas of the Drosophila adult midgut

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Gene name Rab11
Flybase description The gene Rab-protein 11 is referred to in FlyBase by the symbol Dmel\Rab11 (CG5771, FBgn0015790).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 3.4456 7.3553 6.183947 6.2522 3.773162 5.2933 4.53273 4.928303
    Affimetrix absolute value 10.16 10.46 10.786 11.013 10.658 10.964 10.72 10.494
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: GTPase activity.
There is experimental evidence for 27 unique biological process terms, many of which group under: cellular component organization or biogenesis; sensory organ development; multicellular organism reproduction; biological regulation; localization; gamete generation; organelle organization; cell cycle; regulation of developmental process; cell cycle process; fusome organization.
53 alleles are reported.
The phenotypes of these alleles are annotated with 38 unique terms, many of which group under: organ system; organ system subdivision; external compound sense organ; adult segment; cytoplasmic part; organelle; eo support cell; integumentary plate; peripheral nervous system; cell part.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Small GTP-binding protein domain; Small GTPase superfamily; Small GTPase superfamily, Rab type.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of high expression.
Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, during early pupal stages, in adult female stages.
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