Flygut: an atlas of the Drosophila adult midgut

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Gene name Rab6
Flybase description The gene Rab-protein 6 is referred to in FlyBase by the symbol Dmel\Rab6 (CG6601, FBgn0015797).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -2.5792 1.7993 -0.497471 0.4648 -2.094427 -0.36 -1.7534 -1.668564
    Affimetrix absolute value 7.055 8.459 7.972 8.556 7.728 8.524 7.756 7.607
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: protein binding.
There is experimental evidence that it is involved in the biological process: regulation of postsynaptic membrane potential; R7 cell development; axon guidance; exocytosis; pole plasm oskar mRNA localization; oocyte microtubule cytoskeleton polarization; germarium-derived egg chamber formation; compound eye morphogenesis.
74 alleles are reported.
The phenotypes of these alleles are annotated with: rhabdomere R5; rhabdomere R2; retina; rhabdomere R6; rhabdomere R3; macrochaeta; rhabdomere R1; scutellar bristle; interocellar bristle; rhabdomere R4.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Small GTP-binding protein domain; Small GTPase superfamily; Small GTPase superfamily, Rab type.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression.
Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, during early pupal stages.
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