Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name stck
Flybase description The gene steamer duck is referred to in FlyBase by the symbol Dmel\stck (CG7954, FBgn0020249).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 7.8728 4.074 3.124117 3.6601 2.042873 2.6479 3.98064 3.006529
    Affimetrix absolute value 11.377 9.623 9.817 10.254 9.786 9.953 10.532 9.792
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: zinc ion binding.
There is experimental evidence that it is involved in the biological process: dorsal closure; apposition of dorsal and ventral imaginal disc-derived wing surfaces; embryonic pattern specification; negative regulation of JNK cascade; head involution.
20 alleles are reported.
The phenotypes of these alleles are annotated with: larva; embryonic somatic muscle; embryonic/larval somatic muscle.
It has 4 annotated transcripts and 4 annotated polypeptides.
Protein features are: PINCH; Zinc finger, LIM-type.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression.
Peak expression observed within 18-24 hour embryonic stages.
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