Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name ran
Flybase description The gene ran is referred to in FlyBase by the symbol Dmel\ran (CG1404, FBgn0020255).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 2.5343 2.5657 2.262972 2.5376 1.457254 2.0391 1.5627 1.921612
    Affimetrix absolute value 9.748 8.973 9.355 9.714 9.289 9.588 9.181 9.156
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: GTP binding; protein binding.
There is experimental evidence that it is involved in the biological process: regulation of cell shape; cell adhesion; cell cycle; actin filament organization.
9 alleles are reported.
The phenotypes of these alleles are annotated with: photoreceptor cell R7; photoreceptor cell; cone cell; ommatidium; pigment cell.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Ran GTPase; Small GTP-binding protein domain; Small GTPase superfamily.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of high expression.
Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.
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