Flygut: an atlas of the Drosophila adult midgut

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Gene name JIL-1
Flybase description The gene JIL-1 is referred to in FlyBase by the symbol Dmel\JIL-1 (CG6297, FBgn0020412).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -10.8487 -7.8991 -12.364012 -13.9179 -20.323757 -18.6303 -10.6207 -18.037707
    Affimetrix absolute value 4.974 4.659 4.578 4.589 4.459 4.344 5.178 4.113
    Affymetric present call in "x" number of chips 3 3 2 3 2 3 3 2
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: histone kinase activity (H3-S10 specific); protein kinase activity.
There is experimental evidence that it is involved in the biological process: female meiosis chromosome segregation; negative regulation of chromatin silencing; chromatin organization; chromosome organization; oogenesis.
47 alleles are reported.
The phenotypes of these alleles are annotated with 13 unique terms, many of which group under: organelle; organ system; multicellular structure; anatomical structure; intracellular organelle part; intracellular non-membrane-bounded organelle; intracellular organelle; ovariole; nucleus; organ system subdivision.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: AGC-kinase, C-terminal; Protein kinase, ATP binding site; Protein kinase, C-terminal; Protein kinase, catalytic domain; Protein kinase-like domain; Serine/threonine-protein kinase domain; Serine/threonine-protein kinase, active site; Serine/threonine-protein kinase-like domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression.
Peak expression observed at stages throughout embryogenesis, during late larval stages, at stages throughout the pupal period, in stages of adults of both sexes.
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