Flygut: an atlas of the Drosophila adult midgut

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Gene name Rack1
Flybase description The gene Receptor of activated protein kinase C 1 is referred to in FlyBase by the symbol Dmel\Rack1 (CG7111, FBgn0020618).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 19.7317 30.0206 19.025143 15.6461 10.804668 13.8887 15.11356 16.376278
    Affimetrix absolute value 12.705 12.516 12.41 12.346 12.185 12.338 12.452 12.216
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
It is reported to have molecular function: protein kinase C binding.
There is experimental evidence that it is involved in the biological process: wing disc development; locomotory behavior; oviposition; cuticle development; oogenesis.
9 alleles are reported.
The phenotypes of these alleles are annotated with: ring canal; trichogen cell; egg; cuticle; ovary; wing; female germline stem cell; egg chamber.
It has one annotated transcript and one annotated polypeptide.
Protein features are: G-protein beta WD-40 repeat; WD40 repeat; WD40 repeat 2; WD40 repeat, conserved site; WD40 repeat, subgroup; WD40 repeat-like-containing domain; WD40-repeat-containing domain; WD40/YVTN repeat-like-containing domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression.
Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, in adult female stages.
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