Flygut: an atlas of the Drosophila adult midgut

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Gene name Vps28
Flybase description The gene Vacuolar protein sorting 28 is referred to in FlyBase by the symbol Dmel\Vps28 (CG12770, FBgn0021814).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 1.6238 2.0753 1.516969 1.5421 1.181338 1.3921 1.36605 1.443087
    Affimetrix absolute value 9.106 8.666 8.773 8.997 8.993 9.034 8.99 8.76
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: protein binding.
There is experimental evidence that it is involved in the biological process: regulation of multivesicular body size involved in endosome transport; actin cytoskeleton organization; compound eye development; embryo development ending in birth or egg hatching; sperm individualization; negative regulation of growth of symbiont in host.
9 alleles are reported.
The phenotypes of these alleles are annotated with: embryonic/larval digestive system; spermatid; spermatozoon.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Vacuolar protein sorting-associated, VPS28; Vacuolar protein sorting-associated, VPS28, C-terminal; Vacuolar protein sorting-associated, VPS28, N-terminal.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression.
Peak expression observed in adult male stages.
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