Flygut: an atlas of the Drosophila adult midgut

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Gene name Chd3
Flybase description The gene Chd3 is referred to in FlyBase by the symbol Dmel\Chd3 (CG9594, FBgn0023395).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -43.495 -28.5378 -37.123243 -42.5649 -60.75439 -43.9466 -49.35641 -42.789816
    Affimetrix absolute value 2.984 2.789 2.984 2.995 2.842 3.111 2.931 2.857
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: ATP-dependent DNA helicase activity; chromatin binding; helicase activity.
Based on sequence similarity, it is predicted to be involved in the biological process: chromatin assembly or disassembly.
5 alleles are reported.
The phenotype of these alleles is annotated with: trichogen cell.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Chromo domain; Chromo domain-like; Chromo domain/shadow; DEAD-like helicase; DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site; Domain of unknown function DUF1087; Helicase, C-terminal; SNF2-related; Zinc finger, FYVE/PHD-type; Zinc finger, PHD-finger; Zinc finger, PHD-type; Zinc finger, PHD-type, conserved site; Zinc finger, RING/FYVE/PHD-type.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression.
Peak expression observed within 00-12 hour embryonic stages, in adult female stages.
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