Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name stan
Flybase description The gene starry night is referred to in FlyBase by the symbol Dmel\stan (CG11895, FBgn0024836).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -49.7315 -25.5579 -41.569829 -53.4034 -56.492544 -51.7102 -53.80382 -41.548414
    Affimetrix absolute value 2.779 2.955 2.859 2.65 2.948 2.876 2.804 2.937
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: receptor signaling protein activity.
There is experimental evidence for 16 unique biological process terms, many of which group under: cellular component organization or biogenesis; biological regulation; neuron differentiation; neuron projection development; establishment of planar polarity; sensory organ development; regulation of developmental process; cell adhesion; embryonic pattern specification; compound eye photoreceptor development; system development.
53 alleles are reported.
The phenotypes of these alleles are annotated with 20 unique terms, many of which group under: organ system subdivision; organ system; adult segment; peripheral nervous system; external compound sense organ; thoracic segment; embryonic/larval neuron; non-connected developing system; synapse; neuromuscular junction.
It has 5 annotated transcripts and 5 annotated polypeptides.
Protein features are: Cadherin; Cadherin conserved site; Cadherin-like; Concanavalin A-like lectin/glucanase; Concanavalin A-like lectin/glucanase, subgroup; Domain of unknown function DUF3497; EGF; EGF-like calcium-binding; EGF-like region, conserved site; EGF-like, laminin; Epidermal growth factor-like; Epidermal growth factor-like, type 3; GPCR, family 2, extracellular hormone receptor domain; GPCR, family 2, secretin-like; GPCR, family 2-like; GPS domain; Laminin G domain; Laminin G, subdomain 2.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression.
Peak expression observed within 06-18 hour embryonic stages, at stages throughout the pupal period.
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