Flygut: an atlas of the Drosophila adult midgut

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Gene name skpA
Flybase description The gene skpA is referred to in FlyBase by the symbol Dmel\skpA (CG16983, FBgn0025637).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 9.6005 10.2286 5.211776 7.7067 3.894204 7.2864 5.85485 5.338346
    Affimetrix absolute value 11.666 10.962 10.539 11.326 10.706 11.426 11.092 10.613
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: protein binding.
There is experimental evidence that it is involved in the biological process: regulation of protein stability; regulation of centrosome duplication; mitotic cell cycle G2/M transition DNA damage checkpoint; mitosis; centrosome duplication; chromosome condensation; DNA endoreduplication; neurogenesis; positive regulation of mitotic cell cycle.
27 alleles are reported.
The phenotypes of these alleles are annotated with: embryonic/larval digestive system; imaginal disc; melanotic mass; chromatin; embryonic/larval central nervous system.
It has 8 annotated transcripts and 8 annotated polypeptides.
Protein features are: BTB/POZ fold; E3 ubiquitin ligase, SCF complex, Skp subunit; SKP1 component; SKP1 component, POZ; SKP1 component, dimerisation.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression.
Peak expression observed at stages throughout embryogenesis, during early pupal stages, in adult female stages.
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