Flygut: an atlas of the Drosophila adult midgut

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Gene name cry
Flybase description The gene cryptochrome is referred to in FlyBase by the symbol Dmel\cry (CG3772, FBgn0025680).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.0917 1.3188 -1.403712 -1.5364 -1.655273 -1.614 1.65654 -1.322697
    Affimetrix absolute value 8.288 8.013 7.692 7.776 8.039 7.875 9.276 7.837
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: photoreceptor activity; flavin adenine dinucleotide binding; blue light photoreceptor activity; protein binding.
There is experimental evidence for 13 unique biological process terms, many of which group under: biological regulation; response to stimulus; response to light stimulus; rhythmic process; response to abiotic stimulus; detection of abiotic stimulus; system process; circadian rhythm; locomotory behavior; protein localization to nucleus; sensory perception of light stimulus.
51 alleles are reported.
The phenotypes of these alleles are annotated with: antenna; pacemaker neuron.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Cryptochrome/DNA photolyase, class 1; DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; Rossmann-like alpha/beta/alpha sandwich fold.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression.
Peak expression observed in adult male stages.
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