Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name CG2790
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG2790 (FBgn0027599).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -4.6256 -3.7844 -4.475171 -3.7809 -6.31358 -5.3233 -4.96159 -5.875957
    Affimetrix absolute value 6.202 5.701 6.035 6.478 6.115 6.156 6.247 5.77
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: heat shock protein binding; unfolded protein binding; zinc ion binding; nucleic acid binding.
An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: protein folding.
3 alleles are reported.
The phenotype of these alleles is annotated with: trichogen cell.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Heat shock protein DnaJ; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, conserved site; Zinc finger, C2H2; Zinc finger, C2H2-like; Zinc finger, U1-type; Zinc finger, double-stranded RNA binding.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression.
Peak expression observed at stages throughout embryogenesis, in stages of adults of both sexes.
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