Flygut: an atlas of the Drosophila adult midgut

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Gene name Sucb
Flybase description The gene Sucb is referred to in FlyBase by the symbol Dmel\Sucb (CG10622, FBgn0029118).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.1875 -0.2808 -0.42744 -1.6067 -1.136125 1.4734 -1.56045 0.344543
    Affimetrix absolute value 8.173 7.678 8.069 7.718 8.583 9.102 7.908 8.256
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: succinate-CoA ligase (GDP-forming) activity.
Based on sequence similarity, it is predicted to be involved in the biological process: tricarboxylic acid cycle.
7 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp fold, subdomain 1; ATP-grasp fold, subdomain 2; ATP-grasp fold, succinyl-CoA synthetase-type; Succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase, beta subunit, conserved site; Succinyl-CoA synthetase-like.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed within 06-12 hour embryonic stages, at stages throughout the larval period.
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