Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name Ef1gamma
Flybase description The gene Ef1γ is referred to in FlyBase by the symbol Dmel\Ef1γ (CG11901, FBgn0029176).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 12.7067 16.6318 7.538668 9.7686 4.600989 7.3708 10.41232 7.53001
    Affimetrix absolute value 12.075 11.66 11.056 11.664 10.93 11.431 11.912 11.059
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: translation elongation factor activity.
There is experimental evidence that it is involved in the biological process: autophagic cell death; salivary gland cell autophagic cell death.
14 alleles are reported.
The phenotypes of these alleles are annotated with: eye; ommatidium.
It has 3 annotated transcripts and 3 annotated polypeptides.
Protein features are: Glutathione S-transferase, C-terminal; Glutathione S-transferase, C-terminal-like; Glutathione S-transferase, N-terminal; Glutathione S-transferase/chloride channel, C-terminal; Thioredoxin-like fold; Translation elongation factor EF1B, gamma chain, conserved.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression.
Peak expression observed within 00-12 hour embryonic stages, during early larval stages.
.