Flygut: an atlas of the Drosophila adult midgut

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Gene name CG1673
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG1673 (FBgn0030482).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -3.6983 -4.257 -10.546111 -13.1048 -36.64356 -52.0239 -18.86969 -18.286241
    Affimetrix absolute value 6.539 5.539 4.865 4.686 3.627 2.862 4.665 4.159
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: branched-chain-amino-acid transaminase activity.
Based on sequence similarity, it is predicted to be involved in the biological process: branched chain family amino acid biosynthetic process.
5 alleles are reported.
The phenotype of these alleles is annotated with: mesothoracic tergum.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Aminotransferase, class IV; Aminotransferase, class IV, conserved site; Branched-chain amino acid aminotransferase II.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression.
Peak expression observed during early larval stages.
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