Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name CG4420
Flybase description The gene rings lost is referred to in FlyBase by the symbol Dmel\rngo (CG4420, FBgn0030753).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.2345 0.3246 -1.441031 -0.5649 -1.864714 -1.3099 -3.62088 -1.691166
    Affimetrix absolute value 8.106 7.608 7.665 8.111 7.873 8.173 6.722 7.532
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: ubiquitin binding; proteasome binding.
There is experimental evidence that it is involved in the biological process: female germline ring canal formation.
12 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Peptidase A2A, retrovirus, catalytic; Peptidase aspartic; Peptidase aspartic, catalytic; Peptidase aspartic, eukaryotic predicted; UBA-like; Ubiquitin; Ubiquitin supergroup; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed within 00-12 hour embryonic stages, during late larval stages, during early pupal stages, in adult female stages.
.