Flygut: an atlas of the Drosophila adult midgut

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Gene name CG4896
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG4896 (FBgn0031319).
Expression data along the gut
    Created with Highcharts 6.0.3Fold change compared to full gutRegion-specific expression of CG4896 along the gutCropCardia/R1R2R3R4R5Hindgut-2-1012Highcharts.com
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -6.1982 -3.4475 -4.626662 -4.776 -6.667179 -6.8511 -8.47693 -6.895529
    Affimetrix absolute value 5.791 5.834 5.989 6.142 6.025 5.797 5.49 5.513
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Created with Highcharts 6.0.3Fold change compared toUnchallengedFold change compared to UnchallengedExpression of CG4896 in different experimental conditionsEcc15 4hEcc15 16hPe 4hPe 16hPe gacA 4hPe gacA 16h-2-1012Highcharts.com
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: mRNA binding.
The biological processes in which it is involved are not known.
7 alleles are reported.
No phenotypic data is available.
It has 4 annotated transcripts and 4 annotated polypeptides.
Protein features are: D111/G-patch; Nucleotide-binding, alpha-beta plait; RNA recognition motif domain; Zinc finger, C2H2-like; Zinc finger, RanBP2-type.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression.
Peak expression observed at stages throughout the pupal period, in adult male stages.
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