Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name eys
Flybase description The gene eyes shut is referred to in FlyBase by the symbol Dmel\eys (CG33955, FBgn0031414).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -30.0493 -15.023 -21.253035 -29.2588 -31.30898 -29.1337 -35.34334 -22.024854
    Affimetrix absolute value 3.52 3.718 3.844 3.517 3.797 3.699 3.408 3.828
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: extracellular matrix structural constituent.
There is experimental evidence that it is involved in the biological process: cell morphogenesis; rhabdomere development; temperature compensation of the circadian clock.
36 alleles are reported.
The phenotypes of these alleles are annotated with: ocellus retinula cell; rhabdomere; photoreceptor cell; ocellus rhabdomere; eye photoreceptor cell stalk; ommatidium.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Concanavalin A-like lectin/glucanase; Concanavalin A-like lectin/glucanase, subgroup; EGF; EGF-like calcium-binding; EGF-like calcium-binding, conserved site; EGF-like region, conserved site; EGF-type aspartate/asparagine hydroxylation site; Epidermal growth factor-like; Epidermal growth factor-like, type 3; Laminin G domain; Laminin G, subdomain 2.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression.
Peak expression observed during late pupal stages.
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