Flygut: an atlas of the Drosophila adult midgut

 Mouche Logo lab lemaitre Bbcf logo
Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name CG3294
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG3294 (FBgn0031628).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -36.0867 -14.5896 -21.133378 -25.6137 -29.401394 -21.3295 -30.35159 -21.916659
    Affimetrix absolute value 3.284 3.756 3.794 3.732 3.888 4.153 3.746 3.813
    Affymetric present call in "x" number of chips 0 1 0 1 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: mRNA binding.
Based on sequence similarity, it is predicted to be involved in the biological process: nuclear mRNA splicing, via spliceosome.
3 alleles are reported.
No phenotypic data is available.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Nucleotide-binding, alpha-beta plait; RNA recognition motif domain; U2 auxiliary factor small subunit; Zinc finger, CCCH-type.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression.
Peak expression observed within 00-12 hour embryonic stages, at stages throughout the pupal period, in adult male stages.
.