Flygut: an atlas of the Drosophila adult midgut

 Mouche Logo lab lemaitre Bbcf logo
Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name CG3008
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG3008 (FBgn0031643).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.8874 0.5809 -0.467264 -1.4147 -2.438173 -2.0952 -2.2307 -1.6884
    Affimetrix absolute value 7.493 7.916 8.012 7.903 7.492 7.524 7.402 7.527
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
It is reported to have molecular function: protein kinase activity.
An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: protein phosphorylation.
6 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Nucleic acid-binding, OB-fold; Protein kinase-like domain; RIO kinase; RIO-like kinase; Serine/threonine-protein kinase Rio3.
Summary of modENCODE Temporal Expression Profile: Moderatey high expression at all stages of development.
.