Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name Oscillin
Flybase description The gene Oscillin is referred to in FlyBase by the symbol Dmel\Oscillin (CG6957, FBgn0031717).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -3.023 -3.8809 -1.855797 -1.4805 -2.565679 -1.3698 -8.88666 -2.198884
    Affimetrix absolute value 6.824 5.666 7.301 7.825 7.419 8.124 5.54 7.107
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: glucosamine-6-phosphate deaminase activity.
An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: N-acetylglucosamine metabolic process.
5 alleles are reported.
No phenotypic data is available.
It has 7 annotated transcripts and 7 annotated polypeptides.
Protein features are: Glucosamine-6-phosphate isomerase; Glucosamine-6-phosphate isomerase, conserved site; Glucosamine/galactosamine-6-phosphate isomerase.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression.
Peak expression observed within 06-18 hour embryonic stages, during late larval stages, at stages throughout the pupal period.
.