Flygut: an atlas of the Drosophila adult midgut

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Gene name CG11266
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG11266 (FBgn0031883).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.3653 1.0681 -0.354497 -1.2256 -1.494551 -1.4813 -1.44027 -1.479748
    Affimetrix absolute value 7.959 7.711 8.143 8.103 8.2 8.011 8.04 7.737
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: mRNA binding.
There is experimental evidence that it is involved in the biological process: regulation of alternative nuclear mRNA splicing, via spliceosome.
5 alleles are reported.
The phenotype of these alleles is annotated with: trichogen cell.
It has 7 annotated transcripts and 7 annotated polypeptides.
Protein features are: Nucleotide-binding, alpha-beta plait; RNA recognition motif domain; Splicing factor, CC1-like.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression.
Peak expression observed within 00-18 hour embryonic stages, at stages throughout the pupal period, in adult male stages.
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