Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name Samuel
Flybase description The gene SAM-motif ubiquitously expressed punctatedly localized protein is referred to in FlyBase by the symbol Dmel\Samuel (CG31868, FBgn0032330).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -14.4244 -4.4958 -5.698908 -8.7852 -10.623979 -8.5261 -10.42637 -7.975045
    Affimetrix absolute value 4.563 5.452 5.705 5.269 5.396 5.475 5.186 5.282
    Affymetric present call in "x" number of chips 0 2 3 2 3 3 3 2
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence that it is involved in the biological process: regulation of chromatin silencing; regulation of growth.
27 alleles are reported.
The phenotypes of these alleles are annotated with: imaginal disc; embryonic/larval brain.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Sterile alpha motif domain; Sterile alpha motif homology; Sterile alpha motif, type 1; Sterile alpha motif-type.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression.
Peak expression observed within 18-24 hour embryonic stages, during late larval stages, at stages throughout the pupal period.
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