Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name CG1600
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG1600 (FBgn0033188).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 13.873 5.4934 2.946696 3.3695 1.974966 1.4525 6.49642 2.292944
    Affimetrix absolute value 12.201 10.047 9.58 10.135 9.704 9.098 11.241 9.386
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: nucleotide binding; oxidoreductase activity; zinc ion binding.
There is experimental evidence that it is involved in the biological process: response to hypoxia.
6 alleles are reported.
No phenotypic data is available.
It has 3 annotated transcripts and 3 annotated polypeptides.
Protein features are: Alcohol dehydrogenase superfamily, zinc-type; GroES-like; NAD(P)-binding domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of low expression.
Peak expression observed within 18-24 hour embryonic stages, during late larval stages, at stages throughout the pupal period.
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